As far as I understand, all those little diseases are present in the water we put in the tank, just swimming around in there. When the fishes' immune systems are low then the diseases have a chance to get a foothold. (Like how we are swimming in germs and viruses but aren't usually sick). So I wouldn't worry about how your fish got it. It does kind of sound like fin rot to me. My betta is getting over a case of it right now. It can take a while to clear up (weeks) so just keep medicating the tank faithfully with something that is safe for your fishes and be sure to give the whole dose indicated on the label. Its like taking your antibiotics, if you don't finish the bottle you just get sick again. Is salt ok for your fish? I know aquarium salt is helpful for healing rots. Good luck. (:
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